Program blastn blastp blastx tblastn tblastx Database IGS 8-13 CNS 2 min shear HiSeq IGS 8-13 CNS 2 min shear HiSeq DNorm IGS 7-13 CNS 2-3-pooled HiSeqRapid ReDNorm IGS 7-13 CNS 2-3-pooled HiSeqRapid DNorm IGS 7-13 CNS 2 min shear HiSeqRapid DNorm IGS 7-13 CNS 3 min shear HiSeqRapid DNorm IGS 7-13 CNS 2 min shear HiSeqRapid IGS 7-13 CNS 3 min shear HiSeqRapid IGS 8-13 CNS 1.5 min shear HiSeqRapid IGS 8-13 CNS 1 min shear HiSeqRapid IGS 3-13 CNS HiSeq DNorm - PRD25 IGS 3-13 CNS HiSeq DNorm - PRD75 Broad CNS Broad all tissues Broad chemosensory Broad digestive Broad gills Broad heart Broad hepatopancreas Broad hermaphoditic Broad muscle Broad ovotestis Broad salivary glands Broad protein coding predicted
Enter sequence below in FASTA format Or load it from disk
Set subsequence: From       To
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Database Genetic Codes (tblast[nx] only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15)
Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
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